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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944988.1_cds_XP_016487679.1_78384
CDS Infomation

[gene=LOC107807752] [db_xref=GeneID:107807752] [protein=aspartic proteinase Asp1-like] [protein_id=XP_016487679.1] [location=join(50141..50322,51150..51267,51427..51653,51874..52107,52193..52331,52407..52601,52685..52757,52982..53066,53156..53270)] [gbkey=CDS]
Sequence

ATGAACGGGAAATGGAAAGCACCATTTTGCACGCTGTTGGTGTTGTACTCTCTGCTTCTA
TCCGCTTTATTTCAGAGCTGCTACTCTGCCTTTCATCTGCCTCGTCCCATATGGAAGAAG
CAGCAGCAAAAATCTGGTTCCTCTTTTGTGTTCCCTCTCGCTGGAAACGTATATCCTAAA
GGGTATTATCAGGTGACACTTGAGGTTGGCCAACCTCCCAAACCTTACTCTCTTGATATA
GACACTGGTAGTGACCTAACTTGGCTGCAGTGTGATGCACCTTGTGCGAAATGCACCCCG
GCCCCTCACAGTCTTTATAAACCAAATAAAAATGTTGTCATGTGTAAGGATCCTTTATGC
ACGTCCCTTCACTGGCCCAAGAACCATCCTTGTCATGGCCTGGATGAGCAATGTGATTAT
GAGGTTGCATATGCAGATCGTGGTTCATCCTTGGGAGTGCTGGTCAAAGACATGTTTCCA
CTACGATTTACCAATGGTAGCATTGTTGTGCCTCATCTAGTATTTGGTTGTGGTTACAGT
CAAGAAGTTCCAGCTTCTACTCATCCACCTTTTACCGATGGAATTCTTGGTCTGGGCAAT
GGAAAATCAAGCATTGTATCACAATTGAGTGGCTTGGGTCTTATCCGAAATGTAGTGGGT
CACTGTTTAAGTGGGCAAGGTGGAGGTTTTCTTTTCTTTGGCGATGATATTCTCCCCTCA
TCTGGAATTGCTTGGACACCAATCGTGCGAATATCTTCCGAAAAGCACTTCTCTTTGGGA
CCAGCAGAGCTCTTTTTTGATGGACAGGCCACAGGAGTGAAGGGCTTTCCTGTAATTTTT
GACAGTGGAAGTACCTTCAGTTACTTTAGTTCTGAAGCTTACGATATTTTGGTATCTTCG
ATAAAGAAAAACATAAATGCAAAGCAGCTGACTGATGCAGTGGATGACAAAAGCCTTCCT
GTGTGCTGGAATGGTTCCAAATCCTTCAAATCTGTTAATGATGCCACGAGCTACTTCAAG
CCATTAACACTGAGTTTTATGAAAGCTAAGAATGTTGAGCTTCAACTTCAGCCAGAGGCC
TATCTTATACTTACGGAGCATGGTAATGTATGCTTGGGCATATTGAATGGTACAGAAGTC
GGATTAGGAAATTATAATGTGATTGGAGATATTTCTCTACTGGACAAAATGGTGATATAC
GATAATGAGAAACAACAAGTTGGATGGCTTCCAGCAAACTGCAACAGGCTACCTATCAGT
CGTGATCATGGGGAATATTATTATGATGCATACCCTACCAACATGGGCATATTCGAACAG
ATATGTCCTGCAAAGTTTGATTCTTCAAAACAGCAGGCAAGAAAATAA

Peptide Sequence

PEP ID

XP_016487679.1
PEP Infomation

PREDICTED: aspartic proteinase Asp1-like [Nicotiana tabacum]
Sequence

MNGKWKAPFCTLLVLYSLLLSALFQSCYSAFHLPRPIWKKQQQKSGSSFVFPLAGNVYPK
GYYQVTLEVGQPPKPYSLDIDTGSDLTWLQCDAPCAKCTPAPHSLYKPNKNVVMCKDPLC
TSLHWPKNHPCHGLDEQCDYEVAYADRGSSLGVLVKDMFPLRFTNGSIVVPHLVFGCGYS
QEVPASTHPPFTDGILGLGNGKSSIVSQLSGLGLIRNVVGHCLSGQGGGFLFFGDDILPS
SGIAWTPIVRISSEKHFSLGPAELFFDGQATGVKGFPVIFDSGSTFSYFSSEAYDILVSS
IKKNINAKQLTDAVDDKSLPVCWNGSKSFKSVNDATSYFKPLTLSFMKAKNVELQLQPEA
YLILTEHGNVCLGILNGTEVGLGNYNVIGDISLLDKMVIYDNEKQQVGWLPANCNRLPIS
RDHGEYYYDAYPTNMGIFEQICPAKFDSSKQQARK

Transcript Sequence

Gene sequence data has not been registered.